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Get UK Biobank participant Electronic Medical Records (EMR) data in a RAP Spark environment

Source: R/get_emr_spark.R
get_emr_spark.Rd

This function is completely removed. Better to use `get_diagnoses()`. Use a historic release of this package if you really need it https://github.com/lcpilling/ukbrapR/releases

Usage

get_emr_spark(
  codes_df = NULL,
  spark_master = "spark://master:41000",
  verbose = FALSE
)

Arguments

codes_df

A data frame. Contains two columns: `code` and `vocab_id` i.e., a list of diagnostic codes, and an indicator of the vocabulary. Other columns are ignored.

spark_master

A string. The `master` argmuent passed to `sparklyr::spark_connect()`. default='spark://master:41000'

verbose

Logical. Be verbose, default=FALSE

Value

Returns nothing

Author

Luke Pilling